Version

Jalview is available in Hippu and Murska. The program is for academinc use only.

Description

Jalview is a general purpose multiplse sequence alignment editor. It can be used to edit and visulaize protein or nucleotide sequence alignments and to perform some sequence analysis tasks.

Usage

In Hippu and Murska, start Jalview with command:

Jalview

Jalview recognizes following alignment file formats: MSF, FASTA, PIR, CLUSTAL an BCL.

Manuals

• User manual of Jalview.
• Jalview homepage

References

Clamp, M., Cuff, J., Searle, S. M. and Barton, G. J. (2004), "The Jalview Java Alignment Editor" Bioinformatics 12, 426-7.