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Winter School RNA-seq 2016

RNA-seq data analysis
Date: 04.02.2016 12:15 - 05.02.2016 17:00
Location details: The event is organised at the CSC Training Facilities located in the premises of CSC at Keilaranta 14, Espoo, Finland. The best way to reach us is by public transportation; more detailed travel tips are available.
Language: english-language
lecturers: Eija Korpelainen
Maria Lehtivaara
Price: Fee for Finnish academics: 90 EUR. Fee for others: 420 EUR.
The fee covers all materials, lunches as well as morning and afternoon coffees.
The seats are filled in the registration order. You may cancel your attendance without a charge 5 business days prior the course. For cancellations after that and no-shows without a cancellation the full fee will be invoiced.
Additional Information
More info on the course topics: More info about registration issues etc:

This hands-on course introduces the participants to RNA-seq data analysis concepts and tools. It covers the whole workflow from quality control and alignment to quantification and differential expression analysis. Teaching is provided by Eija Korpelainen and Maria Lehtivaara, CSC.

This course is the last part of the CSC BioWeek.



Previous knowledge of Unix and R is required. "Introduction to R" and "Using Taito cluster for high throughput data analysis" -courses organised on the same week will give you a good background knowledge for this course.

Learning outcomes

After the course the participants understand the basic steps of RNA-seq data analysis, and know the working principles and most used parameters of some of the most commonly used tools.


On Thursday, we will begin at 12:15 in the training room Dogmi. If you wish to have lunch before the training, please arrive a bit earlier (around 11:30 for example). Lunch is included in the course fee.

On Friday we start at 9:00.
Course materials