Projects and Collaboration Networks
Service Break
Tapahtumat
Projects and Collaboration Networks
Service Break
Tapahtumat
14.3. - 15.3.

Bioweek: Single cell RNA-seq data analysis using Chipster

March 2019

This introductory course covers single cell RNA-seq data analysis methods, tools and file formats. The free and user-friendly Chipster software is used in the exercises, and the course is thus suitable for everybody.

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Courses and workshops
Methods & Software
2019
bioinformatics chipster rna-seq tess bioweek
13.3.

Bioweek: Understanding your data with R

March 2019

Beginner course for data carpentry and visualization using R.

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Courses and workshops
Methods & Software
2019
bioinformatics r tess
11.3. - 12.3.

Bioweek: Containers, clouds, clusters -combining CSC services in biosciences

March 2019

CSC provides several alternative platforms for doing bioscience related computing. This course provides overview of these services so that after the course the students know how to choose a right platform combination for their analysis. No previous knowledge is required - the course is suitable for everybody!

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Computing Platforms
Courses and workshops
Data & Storage
Methods & Software
2019
bioinformatics taito cloud tess bioweek notebooks
8.3.

Using CSC Environment Efficiently

March 2019

This one day course focuses on using the CSC environment which has been tailored for researchers to be easy and efficient for scientific use.

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Computing Platforms
Courses and workshops
Data & Storage
High-Performance Computing
2019
taito sisu unix linux palvelut shell ssh batch job
6.3.

RNA-seq data analysis with Chipster

March 2019

This hands-on course introduces the participants to RNA-seq data analysis methods, tools and file formats. It covers the whole workflow from quality control and alignment to quantification and differential expression analysis. The free and user-friendly Chipster software is used in the exercises, so no previous knowledge of Unix or R is required.

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Courses and workshops
Methods & Software
2019
bioinformatics chipster rna-seq tess
5.3.

Lidar data analysis in Taito, with PDAL and R

March 2019

Overview of Lidar tools in Taito.

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Computing Platforms
Courses and workshops
Methods & Software
2019
r taito gis spatial data analysis lidar pdal cloudcompare
5.3.

Webinar: Big data series: Apache Spark @ CSC - Introduction

March 2019

Data is everywhere and it is growing! The growth of data volume has led to many challenges when it comes to processing it. Spark, a high-performance distributed computing framework, allows us to tackle big-data problems by distributing the workload across a cluster of machines, making those workflows painless.

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Computing Platforms
Webinars
Data & Storage
2019
data webinar
27.2. - 1.3.

Advanced Parallel Programming

February 2019

This course addresses hybrid programming by combining OpenMP and MPI, as well as more advanced topics in MPI. Also, parallel I/O is discussed and exemplified in the course.

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Courses and workshops
Programming
High-Performance Computing
2019
mpi openmp tess
25.2.

Webinar: Getting started with supercomputing and data management

February 2019

We will demonstrate how efficient computing environment and data management can help YOU -Did you know that all Finnish researchers are entitled to use the CSC services without any extra costs?

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Webinars
2019
webinar
20.2.

MPASSid-työpaja palveluntarjoajille

February 2019

CSC järjestää työpajan 20.2, johon kutsutaan palveluntarjoajia keskustelemaan siitä mitä voisimme tehdä yhdessä, jotta opetuksen ja koulutuksen järjestäjien ja oppijoiden ulottuville saataisiin mahdollisimman paljon ja mahdollisimman helposti uusia palveluita.

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2019
13.2. - 14.2.

Practical Deep Learning

February 2019

This course gives a practical introduction to deep learning, convolutional and recurrent neural networks, GPU computing, and tools to train and apply deep neural networks for natural language processing, images, and other applications.

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Computing Platforms
Courses and workshops
Methods & Software
2019
gpu deep learning machine learning
11.2. - 12.2.

Introduction to using Google Earth Engine

February 2019

The course provides introduction to using GEE focusing on the use of GEE JavaScript Code Editor and optical remote sensing data.

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Courses and workshops
Methods & Software
2019
gis earth engine
8.2.

CANCELED: Linux 3 – Scripting

February 2019

This one day course will introduce you to scripting techniques on Unix/Linux.

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Courses and workshops
Programming
2019
linux bash sed awk scripting tess regexp
4.2. - 5.2.

CANCELED: Linux 1 - Introduction to Linux

February 2019

This two day course will cover the very basics of Unix/Linux. No previous knowledge about these operating systems is expected, as the course serves as an introduction to those who are completely new to Linux. Both days include hands-on exercises.

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Courses and workshops
Programming
Methods & Software
2019
unix linux tess
28.1. - 30.1.

Spatial data analysis with R

January 2019

Analyzing vector and raster data with R and its spatial packages.

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Courses and workshops
Methods & Software
2019
r spatial modelling gis spatial data analysis
23.1. - 25.1.

Python in High-Performance Computing

January 2019

In this course we teach various ways to optimise and parallelise Python programs. Among the topics are performance analysis, efficient use of NumPy arrays, extending Python with more efficient languages (Cython), and parallel computing with message passing (mpi4py) approach.

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Courses and workshops
Programming
High-Performance Computing
2019
python mpi
17.1.

IAM-verkoston tapaaminen

January 2019

Korkeakoulujen IAM-verkosto sparraa korkeakoulujen identiteetinhallinnan (IdM/IAM) kehittämistä vertaistukiperiaatteella. Tapaaminen järjestetään CSC:n koulutusluokassa Espoossa.

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Courses and workshops
IT Security
2019
iam iam-verkosto
18.12.

Protein Modeling with Discovery Studio

December 2018

Introduction to Discovery Studio protein modeling program,

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Computing Platforms
Courses and workshops
Methods & Software
2018
bioinformatics chemistry tess
12.12. - 14.12.

Canceled: GPU Programming with CUDA

December 2018

This course gives a basic introduction to writing GPU applications using CUDA. Building on this, performance tools and how to write efficient CUDA code are discussed. Finally multi-GPU programming both within a node and between nodes, as well as new CUDA features will be presented.

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Courses and workshops
Programming
High-Performance Computing
2018
cuda gpu
3.12. - 4.12.

Python for Biosciences

December 2018

Introduction to Python programming form the perspective of bioscience.

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Courses and workshops
Programming
2018
bioinformatics tess biopython
29.11.

Scientific visualization with Blender

November 2018

Blender is free and open source 3D creation suite, that supports the entire 3D pipeline. Many aspects of Blender will be demoed, depending on the interests of the participants. The focus will be on rendering imported meshes, and creating geometry.

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Courses and workshops
Methods & Software
2018
visualization blender
27.11. - 28.11.

Schrödinger Maestro Hands-on workshop

November 2018

Get an introduction to power usage of the Schrödinger Maestro molecular modeling suite and the Materials Suite including hands-on training.

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Courses and workshops
Methods & Software
2018
bioinformatics chemistry software
21.11.

Pouta Cloud Course

November 2018

This course gives you a practical introduction for using CSC's cloud services Pouta.

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Courses and workshops
2018
20.11.

Webinar: Performance optimization of scientific software III: Improving application scaling

November 2018

The reason for doing high-performance computing is, well, high performance - but is your application as good as it can get, in terms of performance? Watch this webinar series and you will have an answer to that - hopefully together with some ideas on how to improve the observed shortcomings. In the last part, we will talk about some algorithmic considerations and MPI programming practices for improving parallel scalability of MPI-parallel applications.

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Webinars
High-Performance Computing
2018
sisu hpc webinar
19.11. - 20.11.

Analysing large datasets with Apache Spark

November 2018

Spark is a high-performance distributed computing framework, which allows to tackle big-data problems by distributing the workload across a cluster of machines. This two day course addresses the technical architecture and use cases of Spark, writing Spark code using Python, and using Spark's machine learning library to perform ML based tasks.

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Courses and workshops
Programming
Methods & Software
2018
data software programming
19.11.

Using CSC Services

November 2018

This half-day seminar is meant for the state research institutes. It gives a general overview of CSC services together with a hands-on introduction on getting access to CSC resources and using CSC computing servers.

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Computing Platforms
Courses and workshops
Seminars and conferences
2018
taito pouta cloud
13.11.

Webinar: Julia environment on Taito

November 2018

Julia is a new emerging high-level, high-performance programming language. In other words, it aims to be simple to write and fast to run. This webinar presents you the Julia programming environment on CSC's Taito cluster. You don't need any preliminary knowledge about the language to follow this presentation.

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Webinars
Methods & Software
2018
webinar julia
12.11. - 14.11.

Introduction to Python GIS

November 2018

Learn to use Python for spatial analysis and data management.

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Courses and workshops
Programming
2018
python gis spatial data analysis
8.11. - 9.11.

Linux 2 - Intermediate Linux

November 2018

This is a continuation course to Linux 1 - Introduction to Linux.

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Computing Platforms
Courses and workshops
Programming
2018
unix linux bash
Projects and Collaboration Networks
Service Break
Tapahtumat
Projects and Collaboration Networks
Service Break
Tapahtumat