|Aika:||25.03.2019 9:00 - 25.03.2019 17:00|
|Paikan tiedot:||The event is organised at the CSC Training Facilities located in the premises of CSC at Keilaranta 14, Espoo, Finland. The best way to reach us is by public transportation; more detailed travel tips are available.|
|Luennoitsijat:|| Laxmana Yetukuri (CSC) |
Santosh Bhosale (BTK)
Guest lectures by
Markku Varjosalo (HY)
Maciej Lalowski (HY)
|The fee covers all materials, lunches as well as morning and afternoon coffees.|
Payment can be made with electronic invoicing, credit card, or direct bank transfer. Note that for electronic invoicing you need the operator and e-invoicing address (OVT code) of your organization. Please also note that invoice reference is needed for electronic invoicing in your organization, so please have this available when registering.
Proteomics is a systems biology approach to study the entire protein complement of a cell, tissue, or organism. This large-scale study of proteins is increasingly popular in post genomics era and has found its widespread applications in fields including drug discovery, cardiovascular research, and nutrition research, just to name a few. This course will provide both theoretical and practical training at the introductory level. Participants will learn the principles of current methodologies and apply bioinformatics tools for data analysis.
Mass spectrometry-based proteomics in biological sciences
Proteomics data processing with MaxQuant
Protein quantification and quality control
Statistical analysis in proteomics
This course is aimed at students and researchers who wants to know the basics of proteomics and are willing to apply bioinformatics tools for their analysis. Familiarity with mass spectrometry-based principle and some basic knowledge of R is considered beneficial.
After the course participant are expected to understand the basics of proteomic methods and be able to use bioinformatics tools for their analyses.
9.00 - 9.15 Opening session and practicalities
9.15 - 9:45 MS-based Proteomics in Biosciences
9:45 - 10:00 Coffee break
10:00 -10:30 Targeted approaches in proteomics
10:30 - 11:00 Bioinformatics analysis of proteomics data
11:00 - 11:20 Introduction to Maxquant software
11:20 - 12: 20 Lunch
12:20 - 14:15 Data processing with Maxquant software
14:15 - 14:30 Coffee break
14:30 - 15:00 Proteomics resources at csc
15:00 - 16:45 Statistical analysis with R
16:45 - 17:00 Course wrap-up