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null bioweek 2018 virtual machines
Bioweek: Using cPouta cloud in bioinformatics
Date: 08.02.2018 9:00 - 08.02.2018 17:00
Location details: The event is organised at the CSC Training Facilities located in the premises of CSC at Keilaranta 14, Espoo, Finland. The best way to reach us is by public transportation; more detailed travel tips are available.
Language: english-language
lecturers: Kimmo Mattila Ari-Matti Saren
Price:
  • 60 for-finnish-academics
  • 280 for-others
The fee covers all materials, lunches as well as morning and afternoon coffees.
registration-closed
The seats are filled in the registration order. If a cancellation is received five (5) business days prior to the course, the course fee will be refunded with the exception of a handling fee of 10 €. For no-shows and cancellations after the cut of date no refunds will be made. Registration can be transferred to someone else from the same organization without additional charge.

Payment can be made with electronic invoicing, credit card, or direct bank transfer. Note that for electronic invoicing you need the operator and e-invoicing address (OVT code) of your organization. Please also note that invoice reference is needed for electronic invoicing in your organization, so please have this available when registering.
Additional Information
Content: kimmo.mattila@csc.fi
Practicalities: event-support@csc.fi

Setting up a virtual machine in the cPouta Iaas cloud allows CSC customers to create and manage their own bioinformatics environments. This is useful especially in case of tools and services that need super-user access or that utilize features that are not available for normal users in Taito supercluster (typically running www or database servers).

This course day provides an introduction to the basic features of the cPouta cloud and demonstrates how a virtual bioinformatics server is set up in cPouta.

Bioweek

…is a weeks worth of courses assembled especially with bioscientists in mind. Participate in all of them, or just pick the ones you find most interesting!

5.2. Introduction to base R

6.2. Data visualisation using RStudio and ggplot 

7.2. Computing intensive bioinformatics analysis on Taito  

8.2. Using cPouta cloud in bioinformatics 

9.2. Single cell RNA-seq data analysis using Chipster 

Course materials