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null Migrating_bioinformatics_analyses_from_Taito_to_Puhti
Migrating bioinformatics analyses from Taito to Puhti
Date: 12.11.2019 9:00 - 12.11.2019 17:00
Location details: The event is organised at the CSC Training Facilities located in the premises of CSC at Keilaranta 14, Espoo, Finland. The best way to reach us is by public transportation; more detailed travel tips are available.
Language: english-language
lecturers: Kimmo Mattila (CSC) Ari-Matti Sarén (CSC)
  • 60 for-finnish-academics
  • 280 for-others
The fee covers all materials, lunches as well as morning and afternoon coffees.
The seats are filled in the registration order. If a cancellation is received five (5) business days prior to the course, the course fee will be refunded with the exception of a handling fee of 10 €. For no-shows and cancellations after the cut of date no refunds will be made. Registration can be transferred to someone else from the same organization without additional charge.

Payment can be made with electronic invoicing, credit card, or direct bank transfer. Note that for electronic invoicing you need the operator and e-invoicing address (OVT code) of your organization. Please also note that invoice reference is needed for electronic invoicing in your organization, so please have this available when registering.
Additional Information


Taito server will be deprecated at the end of 2019. This course will provide the necessary skills needed to migrate your analyses and data to the new platform: Puhti and Allas.

Learning outcome

After this course you should be able to start migrating your data to Allas and start running your jobs in Puhti.


This course is intended for researchers who are currently running their analyses in Taito. We assume course participants are already familiar with running batch jobs in CSC systems and will mainly cover only the differences between Taito and Puhti.

Course is mainly aimed at biosicientists, but most of the content is general and not linked to any specific science area.



Data management with Allas

- What is Allas?

- Using Allas from Taito and Puhti

- Assessing Allas from your local environment



Using Puhti

- Puhti system

- Puhti disk areas

- Module system and applications

- Running jobs

Course materials